Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015798252.1_cds_XP_016459324.1_5250
CDS Infomation

[gene=LOC107782895] [db_xref=GeneID:107782895] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016459324.1] [location=complement(join(137679..138299,140959..141876))] [gbkey=CDS]
Sequence

ATGGAGCTACAACTTTATTCCCTTGCTCTTGCCACTTCCCTCACATTACTTTTCCTTCTG
ATTGTGAAGTTATCTAAGAAATTAGCAAAAAACCCTAATCTAAACTTGCCTCCAGGTCCA
TGGAAATTGCCTCTCCTAGGTAGTATTCACCACTTAATAAGCATATTACCTCACCATACT
CTGAGAGATTTAGCCAAAAAGCACGGCCCGTTAATGCACTTGCAGCTTGGTGAAATCTCT
ACAATAGTTATTTCGACTCCTCAAGCAGCCAAAGAGGTATTAAAAGTTCAAGACATCGCA
TTCACAAATCGCCCTGAGCTTTTAAGTGTCAAGATTTTGTGTTACAACTATTCGGATATT
GCTTTTGCACCCTATGGAAATTACTGGAGACAAATGCGTAAGTTGTGCACGTTAGAACTC
TTGAGTGCCAAGAATGTACAATCATTTGCCTCTATAAGGGAGGAAGAAGCATTCGACCTT
GTTGAATATGTGAAATCAAAATCTGGATCCACTATTAACCTTACAGAAAAGTTGTATGCT
CTTACAAATGCTGTAATTTGTAGAGCAGCATTTGGGAAGAGGAGAAAAGAAGAATCAGCA
TATTTTATGTCTTTGATAAAGGAAGTGTCTTTAATGGTAACAGGTTTGGATATAAGTGAA
GTGTTTCCTTCACTCAAATTTTTGCATGCCATTACTGGGACAAAAGCAAAATTAGTGAAG
CTTCACAAAAAGCTTGACAAGGTGCTTGACATGATAATTGAAGAGCATAAGGAGAACCTG
CAATTAGTAAGCTTGAAAAAGAATGGTGAAGAAGAATCAATAAGAAAAGAAGATTTGGTG
AATTTGCTATTGAGACTCCAAGAAAGTGGCACTCTTGAATTTCCCTTCACTGCAGACAAT
ATCAAAGCAGTCATATTGGACATGTTTGTAGCCGGGACTGAGACTTCAGCTACCGTTCTT
GATTGGGCAATGGTAGAAATGATGAGAAATCCCAAAGTCATGGAAAAGGCACAAATAGAA
TTGAGACAAATTCTCAAGGGAAAGAGAAGAGTAAAAGAGAATGATTTAAAAGAAGTGAGG
TATCTAAAGTTAGTAATTAAAGAAACTCTAAGGTTACATCCACCACTTCCTTTGTTACTT
CCAAGAGAATGCAGGGAGCAATGTGCAATTAATGGATATGATATTCCCATAAAAACAAAG
GTAATTGTAAATGCATGGGCAATTAATAGAGATGTTGAGTTTTGGGAAGATGCTGAGAGA
TTTGTACCAGAGAGGTTCAATGATAGTAGAAATAATATGGAATTTATAGGACAAGAGTTT
GAGTATTTACCATTTGGGGGAGGAAGAAGAATGTGCCCTGGAATTTCATTTGGTTTAGCC
AACATTGAGCTGACTTTAGCTCAACTTCTTTATTATTTCAATTGGAAGCTGCCTAATGAG
ATGAAGCCTGAGGATCTTGATGTTACTGAAACACCTGGTTCTAGCTGCAGAAGGAAATGT
AATTTGTATGTAATTGCAACACCTGTAATAATGGAATAA

Peptide Sequence

PEP ID

XP_016459324.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MELQLYSLALATSLTLLFLLIVKLSKKLAKNPNLNLPPGPWKLPLLGSIHHLISILPHHT
LRDLAKKHGPLMHLQLGEISTIVISTPQAAKEVLKVQDIAFTNRPELLSVKILCYNYSDI
AFAPYGNYWRQMRKLCTLELLSAKNVQSFASIREEEAFDLVEYVKSKSGSTINLTEKLYA
LTNAVICRAAFGKRRKEESAYFMSLIKEVSLMVTGLDISEVFPSLKFLHAITGTKAKLVK
LHKKLDKVLDMIIEEHKENLQLVSLKKNGEEESIRKEDLVNLLLRLQESGTLEFPFTADN
IKAVILDMFVAGTETSATVLDWAMVEMMRNPKVMEKAQIELRQILKGKRRVKENDLKEVR
YLKLVIKETLRLHPPLPLLLPRECREQCAINGYDIPIKTKVIVNAWAINRDVEFWEDAER
FVPERFNDSRNNMEFIGQEFEYLPFGGGRRMCPGISFGLANIELTLAQLLYYFNWKLPNE
MKPEDLDVTETPGSSCRRKCNLYVIATPVIME

Transcript Sequence

Gene sequence data has not been registered.